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SQUCS at MEDIQA-SYNUR 2026: A Multi-Agent Open Source LLM System for Nursing Observation Extraction

Proceedings of the 8th Workshop on Clinical Natural Language Processing (Clinical NLP) @ LREC 2026

DOI:10.63317/3cuv6m9wb5pm

Abstract

Clinical nursing documentation contains detailed observational information that is essential for patient monitoring and clinical decision-making, yet this information is predominantly recorded in free-text form. The MEDIQA-SYNUR shared task addresses this challenge by requiring systems to extract structured nursing observations from clinical transcripts under strict constraints on evidence grounding and value normalization. In this work, we present a multi-agent large language model (LLM)–based system for the MEDIQA-SYNUR task. We utilize the Llama3 open source LLM for this purpose for ease of local deployment within hospital digital infrastructure. Our system decomposes the extraction process into specialized agents responsible for schema-guided extraction, rule-based validation, and precision-oriented filtering. Starting from a baseline multi-agent pipeline, we conduct a systematic error analysis over the entire development set, examining all false positive and false negative predictions. Our final configuration, selected after extensive exploration and error analysis, combined transcript segmentation, the precision agent, and a suppression table derived from development-set analysis. On the development set, this setup achieved an F1 score of 0.6930 (precision = 0.6427, recall = 0.7518). Applying the same configuration directly to the test set, without any additional tuning, yielded an F1 score of 0.5923 (precision = 0.5292, recall = 0.6725). These results represent the most effective balance of precision and recall achieved through our iterative refinements and reflect the final state of the system as submitted for the competition

Details

Paper ID
lrec2026-ws-clinicalnlp-14
Pages
pp. 125-135
BibKey
jeeballah-etal-2026-squcs
Editors
Asma Ben Abacha, Steven Bethard, Danielle Bitterman, Tristan Naumann, Kirk Roberts
Publisher
European Language Resources Association (ELRA)
ISSN
N/A
ISBN
N/A
Workshop
Proceedings of the 8th Workshop on Clinical Natural Language Processing (Clinical NLP) @ LREC 2026
Location
Palma, Mallorca, Spain
Date
11 - 16 May 2026

Authors

  • RJ

    Riham JeebAllah

  • AA

    Adhari AlZaabi

  • AA

    Abdulrahman Khalifa AAlAbdulsalam

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